From 2dfc5e7afedf4566027fbf4b892b770330667cf2 Mon Sep 17 00:00:00 2001
From: Loraine Gueguen <loraine.gueguen@sb-roscoff.fr>
Date: Tue, 4 May 2021 13:09:08 +0200
Subject: [PATCH] Keep species with best assembly in
get_uniq_species_dict_list() (will be main jbrowse url).
---
utilities.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/utilities.py b/utilities.py
index 7145430..82f0b4c 100755
--- a/utilities.py
+++ b/utilities.py
@@ -166,7 +166,7 @@ def get_unique_species_dict_list(sp_dict_list):
for sp in sp_dict_list:
for gspecies in unique_species_genus_species:
- if gspecies not in unique_species_dict.keys() or sp[0]["description"]["main_sp"] == "yes" :
+ if gspecies not in unique_species_dict.keys() or sp["description"]["main_sp"] == "yes" :
unique_species_dict[gspecies] = sp
else:
continue
--
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