From 35b672cef22e35b200f479bfd611984efd91cef9 Mon Sep 17 00:00:00 2001
From: Loraine Gueguen <loraine.gueguen@sb-roscoff.fr>
Date: Tue, 4 May 2021 11:22:44 +0200
Subject: [PATCH] Update org.yml, Readme.
---
README.md | 2 +-
templates/organisms.yml.j2 | 10 +++++-----
2 files changed, 6 insertions(+), 6 deletions(-)
diff --git a/README.md b/README.md
index 677c443..2d077bd 100755
--- a/README.md
+++ b/README.md
@@ -22,7 +22,7 @@ Traefik is a reverse proxy which allows to direct HTTP traffic to various Docker
The Traefik dashboard is deployed at [https://hostname/traefik/](https://hostname/traefik/)
Authelia is an authentication agent, which can be plugged to an LDAP server, and that Traefik can you to check permissions to access services.
-The authentication layer is optional. If used, the config file needs the variables `https_port`, `auth_hostname`, `authelia_config_path`.
+The authentication layer is optional. If used, the config file needs the variables `https_port`, `authentication_domain_name`, `authelia_config_path`.
Authelia is accessed automatically by Traefik to check permissions everytime someones wants to access a page.
If the user is not logged in, he is redirected to the authelia portal.
diff --git a/templates/organisms.yml.j2 b/templates/organisms.yml.j2
index 697e1ef..ff71547 100644
--- a/templates/organisms.yml.j2
+++ b/templates/organisms.yml.j2
@@ -1,15 +1,15 @@
{{ name }}:
description:
- genus: {{ genus }} # Mandatory!
- species: {{ species }} # Mandatory!
+ genus: {{ genus }}
+ species: {{ species }}
sex: {{ sex }}
strain: {{ strain }}
common_name: {{ common_name }}
origin: {{ origin }}
data:
- genome_path: {{ genome_path }} # Mandatory!
- transcripts_path: {{ transcripts_path }} # Mandatory!
- proteins_path: {{ proteins_path }} # Mandatory!
+ genome_path: {{ genome_path }}
+ transcripts_path: {{ transcripts_path }}
+ proteins_path: {{ proteins_path }}
gff_path: {{ gff_path }} # Mandatory!
interpro_path: {{ interpro_path }}
orthofinder_path: {{ orthofinder_path }}
--
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