From 62a4ee33b06d41741de16b2bdd01856ff2b9f71c Mon Sep 17 00:00:00 2001
From: Loraine Gueguen <loraine.gueguen@sb-roscoff.fr>
Date: Tue, 11 May 2021 18:25:37 +0200
Subject: [PATCH] fix galaxy instance
---
gga_load_data.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/gga_load_data.py b/gga_load_data.py
index 9590fd5..6bffec7 100755
--- a/gga_load_data.py
+++ b/gga_load_data.py
@@ -10,7 +10,7 @@ import time
import json
import yaml
-from bioblend.galaxy.objects import GalaxyInstance
+from bioblend import galaxy
import utilities
import speciesData
@@ -275,7 +275,7 @@ class LoadData(speciesData.SpeciesData):
"""
logging.info("Connecting to the galaxy instance (%s)" % self.instance_url)
- self.instance = GalaxyInstance(url=self.instance_url,
+ self.instance = galaxy.GalaxyInstance(url=self.instance_url,
email=self.config["galaxy_default_admin_email"],
password=self.config["galaxy_default_admin_password"]
)
--
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