diff --git a/gga_load_data.py b/gga_load_data.py index b77f1dacbd02428e9bb754202d10b4eed27eca44..484bec4488f7bc1381c8ca43afafb75321b7a62d 100755 --- a/gga_load_data.py +++ b/gga_load_data.py @@ -183,9 +183,11 @@ class LoadData(speciesData.SpeciesData): logging.info("Skipping useless file '%s'" % single_file) continue + single_file_path=os.path.join(CONTAINER_DATA_DIR_ROOT,single_file) + logging.info("Adding file '%s' with type '%s' and name '%s'" % (single_file, ftype, clean_name)) datasets = prj_lib.upload_from_galaxy_fs( - single_file, + single_file_path, folder=folder, link_data_only='link_to_files', file_type=ftype,