From 8f3cbcc5c943e89a6d08e4d375a117d97142757b Mon Sep 17 00:00:00 2001
From: Arthur Le Bars <arthur.le-bars@sb-roscoff.fr>
Date: Mon, 22 Mar 2021 16:49:16 +0100
Subject: [PATCH] get_data docstring indentation
---
gga_get_data.py | 2 +-
gga_init.py | 1 +
2 files changed, 2 insertions(+), 1 deletion(-)
diff --git a/gga_get_data.py b/gga_get_data.py
index 3b92591..ae98f88 100644
--- a/gga_get_data.py
+++ b/gga_get_data.py
@@ -54,7 +54,7 @@ class GetData(speciesData.SpeciesData):
- def make_directory_tree(self):
+ def make_directory_tree(self):
"""
Generate the directory tree for an organism
diff --git a/gga_init.py b/gga_init.py
index 205b74c..2ade1c7 100644
--- a/gga_init.py
+++ b/gga_init.py
@@ -309,6 +309,7 @@ def deploy_stacks(input_list, main_dir, deploy_traefik):
# Deploy individual species stacks
for sp in to_deploy_species_li:
os.chdir(sp)
+ logging.info("Deploying %s stack" % sp)
subprocess.call(["docker", "stack", "deploy", "-c", "./docker-compose.yml", "{0}_{1}".format(sp.split("_")[0], sp.split("_")[1])],
stdout=subprocess.PIPE, stderr=subprocess.PIPE, cwd=".")
logging.info("Deployed %s stack" % sp)
--
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