From 94aea60b4e737e3a7873dbb1e40bfcb93d2221c9 Mon Sep 17 00:00:00 2001
From: Arthur Le Bars <arthur.le-bars@sb-roscoff.fr>
Date: Thu, 1 Apr 2021 21:19:24 +0200
Subject: [PATCH] galaxy tool version change
---
gga_load_data.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/gga_load_data.py b/gga_load_data.py
index 1b29b1e..856d043 100755
--- a/gga_load_data.py
+++ b/gga_load_data.py
@@ -95,7 +95,7 @@ class LoadData(speciesData.SpeciesData):
sapiens_id = str(
get_sapiens_id_final_output["organism_id"]) # needs to be str to be recognized by the chado tool
self.instance.tools.run_tool(
- tool_id="toolshed.g2.bx.psu.edu/repos/gga/chado_organism_delete_organisms/organism_delete_organisms/2.3.3",
+ tool_id="toolshed.g2.bx.psu.edu/repos/gga/chado_organism_delete_organisms/organism_delete_organisms/2.3.4+galaxy0",
history_id=self.history_id,
tool_inputs={"organism": str(sapiens_id)})
except bioblend.ConnectionError:
--
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