From c2b5e5a2f4e0f71068811513fd2d03f3c1e8010d Mon Sep 17 00:00:00 2001
From: Loraine Gueguen <loraine.gueguen@sb-roscoff.fr>
Date: Tue, 11 May 2021 21:52:48 +0200
Subject: [PATCH] fix foldername for upload_from_galaxy_fs()
---
gga_load_data.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/gga_load_data.py b/gga_load_data.py
index 0584632..96401c2 100755
--- a/gga_load_data.py
+++ b/gga_load_data.py
@@ -142,7 +142,7 @@ class LoadData(speciesData.SpeciesData):
for fname, files in folders.items():
if fname and files:
- folder_name = fname[len(CONTAINER_DATA_DIR_ROOT) + 1:]
+ folder_name = re.sub(data_dir_root, CONTAINER_DATA_DIR_ROOT, fname)
logging.info("Creating folder: %s" % folder_name)
folder = self.create_deep_folder(prj_lib, folder_name)
--
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