diff --git a/README.md b/README.md index 7bdb811a2b1144dfb5091f8f9bd414de5c539b82..62f81c5aed692c71bb49e1f9455fb5a99d1c36a8 100755 --- a/README.md +++ b/README.md @@ -66,7 +66,7 @@ in the `examples` folder. **The input file and config file have to be the same for all scripts!** -- Deploy stacks part: +- Deploy Docker stacks: ```bash $ python3 /path/to/repo/gga_init.py input_file.yml \ @@ -76,7 +76,7 @@ $ python3 /path/to/repo/gga_init.py input_file.yml \ [-v/--verbose] ``` -- Copy source data file: +- Copy source data files: ```bash $ python3 /path/to/repo/gga_get_data.py input_file.yml \ @@ -93,7 +93,7 @@ $ python3 /path/to/repo/gga_load_data.py input_file.yml \ [-v/--verbose] ``` -- Run a workflow in galaxy (example): +- Run a workflow in Galaxy (example script, specific to Phaeoexplorer data): ```bash $ python3 /path/to/repo/gga_run_workflow_phaeo_jbrowse.py input_file.yml \