From f24c3645a6dadbc08a9c35d08d75db6cbe00db3e Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Loraine=20Gu=C3=A9guen?=
<loraine-gueguen@users.noreply.github.com>
Date: Tue, 1 Jun 2021 14:08:05 +0200
Subject: [PATCH] debug get picture
---
gga_init.py | 12 ++++++------
utilities.py | 2 ++
2 files changed, 8 insertions(+), 6 deletions(-)
diff --git a/gga_init.py b/gga_init.py
index f8c705e..92bee9e 100755
--- a/gga_init.py
+++ b/gga_init.py
@@ -431,9 +431,9 @@ if __name__ == "__main__":
deploy_stack_for_current_organism.make_compose_files()
logging.info("Successfully generated the docker-compose files for %s %s", deploy_stack_for_current_organism.genus, deploy_stack_for_current_organism.species)
- logging.info("Deploying stacks")
- if args.force_traefik:
- deploy_stacks(input_list=sp_dict_list, main_dir=main_dir, deploy_traefik=True)
- else:
- deploy_stacks(input_list=sp_dict_list, main_dir=main_dir, deploy_traefik=False)
- logging.info("All stacks deployed for organisms in input file %s" % args.input)
+ # logging.info("Deploying stacks")
+ # if args.force_traefik:
+ # deploy_stacks(input_list=sp_dict_list, main_dir=main_dir, deploy_traefik=True)
+ # else:
+ # deploy_stacks(input_list=sp_dict_list, main_dir=main_dir, deploy_traefik=False)
+ # logging.info("All stacks deployed for organisms in input file %s" % args.input)
diff --git a/utilities.py b/utilities.py
index b928b4c..0bad622 100755
--- a/utilities.py
+++ b/utilities.py
@@ -164,6 +164,8 @@ def get_sp_picture(sp_dict_list):
sp_picture_dict[genus_species] = sp[constants.ORG_PARAM_DESC][constants.ORG_PARAM_DESC_PICTURE_PATH]
+ logging.debug("picture dict: %s" % sp_picture_dict)
+
return sp_picture_dict
def get_sp_jbrowse_links(org_list):
--
GitLab