From f86c515d8cb90e9daebc7bc9bca41b6d3a615e7a Mon Sep 17 00:00:00 2001
From: Loraine Gueguen <loraine.gueguen@sb-roscoff.fr>
Date: Thu, 20 May 2021 21:25:09 +0200
Subject: [PATCH] minor fix
---
gga_init.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/gga_init.py b/gga_init.py
index 5584b5d..1025efa 100755
--- a/gga_init.py
+++ b/gga_init.py
@@ -129,7 +129,7 @@ class DeploySpeciesStack(speciesData.SpeciesData):
input_vars = {"genus": self.genus_lowercase, "Genus": self.genus_uppercase, "species": self.species,
"genus_species": self.genus_species, "genus_species_strain_sex": self.species_folder_name,
"genus_species_sex": "{0}_{1}_{2}".format(self.genus_lowercase, self.species_lower, self.sex),
- "strain": self.strain, "sex": self.sex, "Genus_species": "{0} {1}".format(self.genus_uppercase, self.species_lower()),
+ "strain": self.strain, "sex": self.sex, "Genus_species": "{0} {1}".format(self.genus_uppercase, self.species_lower),
"blast": self.blast, "go": self.go, "picture_path": self.picture_path}
if (len(self.config.keys()) == 0):
logging.error("Empty config dictionary")
--
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