# This is the configuration template file used by the gga_init.py, gga_load_data.py and run_workflow.py scripts # "all" section contains variables used by several services at once or the paths to import sensitive files all: hostname: localhost # Required. The hosting machine name dashboard_port: 8001 # Required. The desired port (on the hosting machine) for the traefik container dashboard http_port: 8888 # Required. The HTTP port docker will use on the hosting machine https_port: 8889 # Required for Authelia. The HTTPS port docker will use on the hosting machine proxy_ip: XXXXXXXXXXXX # Required. IP of the upstream proxy (used by Traefik) authentication_domain_name: XXXXXXXXXXXX # Required for Authelia. The authentication domain name. authelia_config_path: /path/to/authelia_config.yml # Required for Authelia. Path to the Authelia configuration file # galaxy-specific variables galaxy: galaxy_default_admin_email: gga@galaxy.org # Required galaxy_defaut_admin_user: gga # Required galaxy_default_admin_password: password # Required webapollo_user: admin_apollo@galaxy.org # Required webapollo_password: apollopass # Required galaxy_config_remote_user_maildomain: mydomain.com # Required. The maildomain used by Galaxy authentication persist_galaxy_data: "True" # Optional. If True, docker data will be backed up. Do not set this variable to "false" for production # tripal-specific variables tripal: tripal_password: tripalpass # Required. Tripal database password (also used by galaxy as an environment variable) banner_path: /my/path/banner.png # Optional. Custom banner path tripal_theme_name: tripal_gga # Optional. Use this to use another theme tripal_theme_git_clone: http://gitlab.sb-roscoff.fr/abims/e-infra/tripal_gga.git # Optional. Use this to install another theme. # jbrowse-specific variables jbrowse: menu_url: "http://localhost:8888/" # Optional. Used with run_workflow_phaeoexplorer.py. If present, this variable is used to define jbrowse menu_url, if absent, will use https://hostname:https_port instead