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Commit 2b707e8e authored by Arthur Le Bars's avatar Arthur Le Bars
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Merge branch 'dev' of gitlab.sb-roscoff.fr:abims/e-infra/gga_load_data into dev

parents e434fd52 8957b500
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1 merge request!1Release 1.0
...@@ -99,11 +99,11 @@ before calling the other scripts** ...@@ -99,11 +99,11 @@ before calling the other scripts**
9) (*Optional*) TODO: Generate and update metadata files 9) (*Optional*) TODO: Generate and update metadata files
## Usage: ## Usage:
- Deploy stacks part: ```$ python3 /path/to/repo/deploy_stacks.py -i your_input_file.yml``` - Deploy stacks part: ```$ python3 /path/to/repo/gga_init.py -i your_input_file.yml```
- Copy source data file and load data into the galaxy container: ```$ python3 /path/to/repo/load_data.py -i your_input_file.yml``` - Copy source data file and load data into the galaxy container: ```$ python3 /path/to/repo/gga_load_data.py -i your_input_file.yml```
- Run a workflow: ```$ python3 /path/to/repo/run_workflow.py -i your_input_file.yml``` - Run a workflow: ```$ python3 /path/to/repo/run_workflow_phaeoexplorer.py -i your_input_file.yml```
**Warning: the input file have to be the same for the 3 steps!** **Warning: the input file have to be the same for the 3 steps!**
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