elasticsearch memory lock removed

templates/gspecies_compose_template.yml.j2

@@ -56,10 +56,22 @@ services:
             ENABLE_JBROWSE: /jbrowse/?data=data/{{ genus_species_sex }}
             # This ENABLE_JBROWSE variable should point to the "best assembly" by default --> tag it in the input file and use it to define this variable correctly (also called
             # unique id in the jbrowse tool parameters == both have to be identical)
+            {% if apollo == "True %}
+            ENABLE_APOLLO: 1
+            {% else %}
             ENABLE_APOLLO: 0
+            {% endif %}
+            {% if blast == "True" %}
             ENABLE_BLAST: 1
+            {% else %}
+            ENABLE_BLAST: 0
+            {% endif %}
             ENABLE_DOWNLOAD: 1
+            {% if wiki == "True" %}
+            ENABLE_WIKI: 1
+            {% else %}
             ENABLE_WIKI: 0
+            {% endif %}
             ENABLE_GO: 0
             ENABLE_ORTHOLOGY: 0
             ENABLE_ORTHOLOGY_LINKS: 0
@@ -108,7 +120,7 @@ services:
         volumes:
             - ./docker_data/elastic_search_index/:/usr/share/elasticsearch/data/
         environment:
-            bootstrap.memory_lock: "true"
+            # bootstrap.memory_lock: "true"
             xpack.security.enabled: "false"
             xpack.monitoring.enabled: "false"
             xpack.ml.enabled: "false"
@@ -209,6 +221,7 @@ services:
             max_attempts: 3
             window: 120s
 
+    {% if blast == "True" %}
     blast:
         image: quay.io/abretaud/sf-blast:latest
         depends_on:
@@ -278,6 +291,7 @@ services:
             - ./docker_data/blast_db/:/var/lib/postgresql/data/
         networks:
             - {{ genus_species }}
+    {% endif %}
 
 #    wiki:
 #        image: quay.io/abretaud/mediawiki