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Commit c31da771 authored by Arthur Le Bars's avatar Arthur Le Bars
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new gspecies docker compose template

parent 451b8550
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1 merge request!1Release 1.0
......@@ -16,8 +16,7 @@ services:
# Download page
- "traefik.http.routers.{{ genus_species }}-nginx.rule=(Host(`{{ hostname }}`) && PathPrefix(`/sp/{{ genus_species }}/download`))"
# - "traefik.http.routers.{{ genus_species }}-nginx.tls=true"
# - "traefik.http.routers.{{ genus_species }}-nginx.entryPoints=webs"
- "traefik.http.routers.{{ genus_species }}-nginx.entryPoints=web" # lg
- "traefik.http.routers.{{ genus_species }}-nginx.entryPoints={{ entrypoint }}" # lg
# - "traefik.http.routers.{{ genus_species }}-nginx.middlewares=sp-auth,sp-app-trailslash,sp-prefix"
- "traefik.http.routers.{{ genus_species }}-nginx.middlewares=sp-app-trailslash,sp-prefix" # lg
- "traefik.http.services.{{ genus_species }}-nginx.loadbalancer.server.port=80"
......@@ -70,8 +69,7 @@ services:
labels:
- "traefik.http.routers.{{ genus_species }}-tripal.rule=(Host(`{{ hostname }}`) && PathPrefix(`/sp/{{ genus_species }}`))"
# - "traefik.http.routers.{{ genus_species }}-tripal.tls=true"
# - "traefik.http.routers.{{ genus_species }}-tripal.entryPoints=webs"
- "traefik.http.routers.{{ genus_species }}-tripal.entryPoints=web" # lg
- "traefik.http.routers.{{ genus_species }}-tripal.entryPoints={{ entrypoint }}" # lg
# - "traefik.http.routers.{{ genus_species }}-tripal.middlewares=sp-auth,sp-trailslash,sp-prefix,tripal-addprefix"
- "traefik.http.routers.{{ genus_species }}-tripal.middlewares=sp-trailslash,sp-prefix,tripal-addprefix" # lg
- "traefik.http.services.{{ genus_species }}-tripal.loadbalancer.server.port=80"
......@@ -138,7 +136,7 @@ services:
GALAXY_CONFIG_MASTER_API_KEY: "{{ galaxy_config_master_api_key }}"
ENABLE_FIX_PERMS: 0
PROXY_PREFIX: /sp/{{ genus_species }}/galaxy
GALAXY_TRIPAL_URL: http://tripal. {{ genus_species }}/tripal/
GALAXY_TRIPAL_URL: http://tripal.{{ genus_species }}/tripal/
GALAXY_TRIPAL_PASSWORD: {{ tripal_password }} # See tripal config above
GALAXY_WEBAPOLLO_URL: http://one-of-the-swarm-node:8888/apollo/
GALAXY_WEBAPOLLO_USER: "{{ webapollo_user }}"
......@@ -158,8 +156,7 @@ services:
labels:
- "traefik.http.routers.{{ genus_species }}-galaxy.rule=(Host(`{{ hostname }}`) && PathPrefix(`/sp/{{ genus_species }}/galaxy`))"
# - "traefik.http.routers.{{ genus_species }}-galaxy.tls=true"
# - "traefik.http.routers.{{ genus_species }}-galaxy.entryPoints=webs"
- "traefik.http.routers.{{ genus_species }}-galaxy.entryPoints=web" #lg
- "traefik.http.routers.{{ genus_species }}-galaxy.entryPoints={{ entrypoint }}"
# - "traefik.http.routers.{{ genus_species }}-galaxy.middlewares=sp-auth,sp-app-trailslash,sp-app-prefix"
- "traefik.http.routers.{{ genus_species }}-galaxy.middlewares=sp-app-trailslash,sp-app-prefix" #lg
- "traefik.http.services.{{ genus_species }}-galaxy.loadbalancer.server.port=80"
......@@ -186,8 +183,7 @@ services:
labels:
- "traefik.http.routers.{{ genus_species }}-jbrowse.rule=(Host(`{{ hostname }}`) && PathPrefix(`/sp/{{ genus_species }}/jbrowse`))"
# - "traefik.http.routers.{{ genus_species }}-jbrowse.tls=true"
# - "traefik.http.routers.{{ genus_species }}-jbrowse.entryPoints=webs"
- "traefik.http.routers.{{ genus_species }}-jbrowse.entryPoints=web" # lg
- "traefik.http.routers.{{ genus_species }}-jbrowse.entryPoints={{ entrypoint }}" # lg
# - "traefik.http.routers.{{ genus_species }}-jbrowse.middlewares=sp-auth,sp-app-trailslash,sp-app-prefix"
- "traefik.http.routers.{{ genus_species }}-jbrowse.middlewares=sp-app-trailslash,sp-app-prefix" #lg
- "traefik.http.services.{{ genus_species }}-jbrowse.loadbalancer.server.port=80"
......@@ -242,8 +238,7 @@ services:
labels:
- "traefik.http.routers.{{ genus_species }}-blast.rule=(Host(`{{ hostname }}`) && PathPrefix(`/sp/{{ genus_species }}/blast`))"
# - "traefik.http.routers.{{ genus_species }}-blast.tls=true"
# - "traefik.http.routers.{{ genus_species }}-blast.entryPoints=webs"
- "traefik.http.routers.{{ genus_species }}-blast.entryPoints=web" # lg
- "traefik.http.routers.{{ genus_species }}-blast.entryPoints={{ entrypoint }}" # lg
# - "traefik.http.routers.{{ genus_species }}-blast.middlewares=sp-big-req,sp-auth,sp-app-trailslash,sp-app-prefix"
- "traefik.http.routers.{{ genus_species }}-blast.middlewares=sp-big-req,sp-app-trailslash,sp-app-prefix" # lg
- "traefik.http.services.{{ genus_species }}-blast.loadbalancer.server.port=80"
......@@ -286,7 +281,7 @@ services:
# labels:
# - "traefik.http.routers.{{ genus_species }}-blast.rule=(Host(`{{ hostname }}`) && PathPrefix(`/sp/{{ genus_species }}/blast`))"
# - "traefik.http.routers.{{ genus_species }}-blast.tls=true"
# - "traefik.http.routers.{{ genus_species }}-blast.entryPoints=webs"
# - "traefik.http.routers.{{ genus_species }}-blast.entryPoints={{ entrypoint }}"
# - "traefik.http.routers.{{ genus_species }}-blast.middlewares=sp-big-req,sp-auth,sp-app-trailslash,sp-app-prefix"
# - "traefik.http.services.{{ genus_species }}-blast.loadbalancer.server.port=80"
# restart_policy:
......
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