release 1.0.1

• copy nginx conf from file or template
• define required param in config_example.yml
• fix species folder name (remove -)
• fix mount of unused galaxy_data_libs.py in docker-compose file

examples/config_example.yml

@@ -26,4 +26,4 @@ tripal:
       tripal_theme_git_clone: http://gitlab.sb-roscoff.fr/abims/e-infra/tripal_gga.git  # Optional. Use this to install another theme.
 # jbrowse-specific variables
 jbrowse:
-      menu_url: "http://localhost:8888/" # Optional. Used with run_workflow_phaeoexplorer.py. If present, this variable is used to define jbrowse menu_url, if absent, will use https://hostname:https_port instead
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+      menu_url: "http://localhost:8888/" # Optional. Used with run_workflow_phaeoexplorer.py: if present, this variable is used to define JBrowse menu_url (to define the template url for the JBrowse feature's link to Tripal), if absent, will use default "https://hostname"
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