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v2.5.0

Loraine Gueguen requested to merge dev into master

Input organisms.yml file

  • Add param database used to customize Tripal display
  • Add params genome_analysis_program, genome_analysis_sourcename, genome_analysis_date, ogs_analysis_program, ogs_analysis_sourcename, ogs_analysis_date

Step "init"

  • Add database env variable in tripal service to customize Tripal display
  • fix picture permission

Step "run workflow Phaeoexplorer"

  • Script gga_run_workflow_phaeo_blastp_interpro.py: runs a Galaxy workflow to load xml BLASTp and Interproscan files, for one or two strains of the same species
  • Script gga_run_workflow_phaeo_blastp_blastx_interpro.py: runs a Galaxy workflow to load xml BLASTp, BLASTx and Interproscan files, for one or two strains of the same species
  • Factorize some methods within parent module run_workflow_phaeo.py
  • Custom analysis program, version, sourcename and date for each analysis (in input organisms.yml file or in gga_run_workflow_phaeo_*.py file)
  • Fix OGS analysis name because used to order analyses on home page
Edited by Loraine Gueguen

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