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Created with Raphaël 2.2.028Jul26251928Jun9732131May241026Apr2514127531Mar2228Feb17151498327Jan2630Nov254318Oct149Sep726Aug25241930Jul29262322330Jun28108432131May3028272524212019181716151412111087654330Apr2721201514131282129Mar252322191811109122Feb1918161154229Jan28211918141317Dec1613Nov648Oct617Sep14109410Aug31Jul2Jun26May9Aprtest: Create parent dirs for trackstest: Trailing slash for dirfix: Path of rnaseq tracks in src_data dir treetest: Print file path (jbrowse tracks)chore: Loggingfeat: Symlink bam and bw files to src_data dir treechore: Syntaxchore: Syntaxrefactor: Map BAM and BW directory in container (read only)test: Invoke workflowtest: Check if dataset ID is correcttest: Set jbrowse dataset instance paramtest: Select correct JBrowse datasetfix: Filter on JBrowse "instead" of "Jbrowse"typo fix: debug logging to display analysis IDs used by galaxy tools (blast interpro workflow)debug logging to display analysis IDs used by galaxy tools (blast interpro workflow)gga_run_workflow_jbrowse workflow parameters names matching constants_phaeo.pysync feature constants param name (jbrowse workflow)fix jbrowse param and incorrect wf param name for 1 organism (blast interpro) (test)skip missing features for blast and interpro (test)added workflow path from constants_phaeo.py for single organism instancesChanged versions of load blast and interpro in Chado galaxy tools from 2.3.4+galaxy0 to 2.3.7+galaxy0 (sqlachemy tool error fix)hda_id get error loghda_id get error loghda_id get error loghda_id get error logFix for bioblend get_datasets method throwing ConnectionErrorNew blast+interproscan branch (merging issues with refactor_blast_interproscan_workflow)fix: Indexfix: Indexfix: Jbrowse dataset filterfix: jinja templatingtest: Print jbrowse datasetstest: Print jbrowse filtered datasetstest: Print jbrowse filtered datasetstest: Print jbrowse filtered datasetstest: Print jbrowse filtered datasetstest: No invoketest: Filter jbrowse datasets, fix planemo templates dirtest: No filter on get_datasets
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