mcerasi

templates/tripal_aphidcyc_links.tpl.php

@@ -34,7 +34,7 @@ else if (preg_match('/pisum/', $current_org) >= 1 && preg_match('/NCBI/', $featu
 }
 else if ($feature->type_id->name == 'polypeptide') {
     foreach ($feature->feature_relationship->subject_id as $rel) {
-        if ($rel->object_id->type_id->name == 'mRNA') {
+        if ($rel->object_id->type_id->name == 'mRNA' || $rel->object_id->type_id->name == 'transcript') {
             $mrna_feat = chado_expand_var($rel->object_id, 'table', 'feature_relationship');
 
             if (count($mrna_feat->feature_relationship->subject_id) == 0) {
@@ -53,7 +53,7 @@ else if ($feature->type_id->name == 'polypeptide') {
         }
     }
 }
-else if ($feature->type_id->name == 'mRNA') {
+else if ($feature->type_id->name == 'mRNA' || $feature->type_id->name == 'transcript') {
     if (count($feature->feature_relationship->subject_id) == 0) {
         // In some cases we might only have mRNA with no genes (brassica napus or transcriptomes)
         $target_id = $feature->uniquename;