add organism variable

templates/tripal_feature_alignments.tpl.php

@@ -162,9 +162,10 @@ if(count($alignments) > 0){ ?>
                 else
                     $url .= 'annotator/loadLink?';
             }
+            $apollo_org = "&oragnism=" .strtolower($feature->organism_id->genus . ' ' . $feature->organism_id->species);
         }
 
-        $feature_loc .= " &nbsp;&nbsp; View in <a href='".$url."loc=".$alignment->name."%3A".($alignment->fmin + 1)."..".$alignment->fmax."'>Apollo</a>";
+        $feature_loc .= " &nbsp;&nbsp; View in <a href='".$url."loc=".$alignment->name."%3A".($alignment->fmin + 1)."..".$alignment->fmax.$apollo_org."'>Apollo</a>";
     }
 
     $rows[] = array(