Merge upstream

• merge upstream
• remove galaxy link
• add link to phaeo wbesite and genomic resources
• remove "other organisms are available at"
• fix structural annotation feature count when there is no genes (count mRNA instead)
• update readme

templates/page--front.tpl.php

@@ -174,6 +174,7 @@
                             <?php if (count($blast_urls) > 1): ?>
                                 </ul>
                             </li>
+                            <?php endif; ?>
                         <?php endif; ?>
                         <?php if (getenv('ENABLE_JBROWSE')): ?>
                             <?php