fix get_organism()

gga_run_workflow_phaeo_blast_interpro.py

@@ -258,9 +258,12 @@ def prepare_history_and_get_wf_param(sp_dict_list, main_dir, config):
 
             analyses_dict_list = run_workflow_for_current_organism.get_analyses()
 
-            org_id = run_workflow_for_current_organism.get_organism()
+            organisms_dict_list = run_workflow_for_current_organism.get_organisms()
+            org_id = run_workflow_for_current_organism.get_organism(organisms_dict_list,
+                                                                    run_workflow_for_current_organism.genus_uppercase,
+                                                                    run_workflow_for_current_organism.chado_species_name)
             if org_id is None:
-                logging.critical("Cannot find required organism in Chado database for %s" % self.full_name)
+                logging.critical("Cannot find required organism in Chado database for %s" % run_workflow_for_current_organism.full_name)
                 sys.exit()
 
             blastp_analysis_id = run_workflow_for_current_organism.add_analysis_if_needed(