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abims
e-infra
gga_load_data
Commits
35b672ce
Commit
35b672ce
authored
3 years ago
by
Loraine Gueguen
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Update org.yml, Readme.
parent
e992631e
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2 merge requests
!9
Release 2.0 (merge dev to master)
,
!6
Todo release 1.1
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README.md
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README.md
templates/organisms.yml.j2
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templates/organisms.yml.j2
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README.md
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35b672ce
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@@ -22,7 +22,7 @@ Traefik is a reverse proxy which allows to direct HTTP traffic to various Docker
The Traefik dashboard is deployed at
[
https://hostname/traefik/
](
https://hostname/traefik/
)
Authelia is an authentication agent, which can be plugged to an LDAP server, and that Traefik can you to check permissions to access services.
The authentication layer is optional. If used, the config file needs the variables
`https_port`
,
`auth
_host
name`
,
`authelia_config_path`
.
The authentication layer is optional. If used, the config file needs the variables
`https_port`
,
`auth
entication_domain_
name`
,
`authelia_config_path`
.
Authelia is accessed automatically by Traefik to check permissions everytime someones wants to access a page.
If the user is not logged in, he is redirected to the authelia portal.
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templates/organisms.yml.j2
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35b672ce
{{ name }}:
description:
genus: {{ genus }}
# Mandatory!
species: {{ species }}
# Mandatory!
genus: {{ genus }}
species: {{ species }}
sex: {{ sex }}
strain: {{ strain }}
common_name: {{ common_name }}
origin: {{ origin }}
data:
genome_path: {{ genome_path }}
# Mandatory!
transcripts_path: {{ transcripts_path }}
# Mandatory!
proteins_path: {{ proteins_path }}
# Mandatory!
genome_path: {{ genome_path }}
transcripts_path: {{ transcripts_path }}
proteins_path: {{ proteins_path }}
gff_path: {{ gff_path }} # Mandatory!
interpro_path: {{ interpro_path }}
orthofinder_path: {{ orthofinder_path }}
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