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Commit a10ada5f authored by Arthur Le Bars's avatar Arthur Le Bars
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Update README

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2 merge requests!11Workflow v2,!9Release 2.0 (merge dev to master)
......@@ -74,8 +74,8 @@ $ python3 /path/to/repo/gga_load_data.py input_file.yml -c/--config config_file
- Run a workflow in galaxy:
```bash
$ python3 /path/to/repo/gga_load_data.py input_file.yml -c/--config config_file --workflow /path/to/workflow.ga [-v/--verbose] [OPTIONS]
--workflow $WORKFLOW (Path to the workflow to run in galaxy. A couple of preset workflows are available in the "workflows" folder of the repository)
$ python3 /path/to/repo/gga_load_data.py input_file.yml -c/--config config_file --workflow workflow_type [-v/--verbose] [OPTIONS]
--workflow (Valid options: "chado_load_fasta_gff_jbrowse", "blast", "intepro", a couple of preset workflows are available in the workflows_phaeoexplorer directory in this repository)
--main-directory $PATH (Path where to access stacks; default=current directory)
```
......
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