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abims
e-infra
gga_load_data
Commits
ad743e3e
Commit
ad743e3e
authored
4 years ago
by
Arthur Le Bars
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jinja2 template syntax error fix
parent
6d44b97d
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1 merge request
!1
Release 1.0
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2 changed files
templates/gspecies_compose_template.yml.j2
+4
-4
4 additions, 4 deletions
templates/gspecies_compose_template.yml.j2
templates/traefik_compose_template.yml.j2
+2
-2
2 additions, 2 deletions
templates/traefik_compose_template.yml.j2
with
6 additions
and
6 deletions
templates/gspecies_compose_template.yml.j2
+
4
−
4
View file @
ad743e3e
...
...
@@ -56,18 +56,18 @@ services:
ENABLE_JBROWSE: /jbrowse/?data=data/{{ genus_species_sex }}
# This ENABLE_JBROWSE variable should point to the "best assembly" by default --> tag it in the input file and use it to define this variable correctly (also called
# unique id in the jbrowse tool parameters == both have to be identical)
{% if apollo ==
"
True %}
{% if apollo == True %}
ENABLE_APOLLO: 1
{% else %}
ENABLE_APOLLO: 0
{% endif %}
{% if blast ==
"
True
"
%}
{% if blast == True %}
ENABLE_BLAST: 1
{% else %}
ENABLE_BLAST: 0
{% endif %}
ENABLE_DOWNLOAD: 1
{% if wiki ==
"
True
"
%}
{% if wiki == True %}
ENABLE_WIKI: 1
{% else %}
ENABLE_WIKI: 0
...
...
@@ -221,7 +221,7 @@ services:
max_attempts: 3
window: 120s
{% if blast ==
"
True
"
%}
{% if blast == True %}
blast:
image: quay.io/abretaud/sf-blast:latest
depends_on:
...
...
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templates/traefik_compose_template.yml.j2
+
2
−
2
View file @
ad743e3e
...
...
@@ -19,7 +19,7 @@ services:
- {{ dashboard_port }}:8080 # added by lg to debug, for dashboard
{% endif %}
- {{ http_port }}:80
{% if
if
https_port is defined %}
{% if https_port is defined %}
- {{ https_port }}:443
{% endif %}
networks:
...
...
@@ -37,7 +37,7 @@ services:
- "traefik.http.routers.traefik-api.tls=true"
- "traefik.http.routers.traefik-api.entryPoints=webs"
{% else %}
- "traefik.http.routers.traefik-api.entryPoints=
{{ entrypoint }}
" # lg
- "traefik.http.routers.traefik-api.entryPoints=
web
" # lg
{% endif %}
- "traefik.http.routers.traefik-api.service=api@internal"
- "traefik.http.middlewares.traefik-strip.stripprefix.prefixes=/traefik"
...
...
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