Commits · fbc87b1707f120b7ef89712b807e6c5194f1cdf9 · abims / e-infra / gga_load_data

Aug 03, 2022
- Move analysis program version, sourcename and date for genome and ogs into input org.yml · fbc87b17
  Loraine Guéguen authored 2 years ago
  
  fbc87b17
- Update analysis program version and sourcename. Update .ga with uniprot db. · 5d70e5be
  Loraine Guéguen authored 2 years ago
  
  5d70e5be
- Custom analysisprogram for each analysis (in wf.py) · c2dbb3ff
  Loraine Guéguen authored 2 years ago
  
  c2dbb3ff
- adjust wf constants · 2c121125
  Loraine Guéguen authored 2 years ago
  
  2c121125
- Add .ga for 2org · c97d17e1
  Loraine Guéguen authored 2 years ago
  
  c97d17e1
- remove unused .ga. Add run_wf_blastp_interpro (no blastx) · 0a43cc40
  Loraine Guéguen authored 2 years ago
  
  0a43cc40
Jul 25, 2022
- gga_run_workflow_jbrowse workflow parameters names matching constants_phaeo.py · 2a954ac2
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  2a954ac2
- sync feature constants param name (jbrowse workflow) · fce90312
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  fce90312
- fix jbrowse param and incorrect wf param name for 1 organism (blast interpro) (test) · 84fdb5df
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  84fdb5df
- hda_id get error log · 4edf13c7
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  4edf13c7
- New blast+interproscan branch (merging issues with refactor_blast_interproscan_workflow) · 81e0aa54
  Troubardours authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  81e0aa54
Jul 29, 2021
- gga_run_workflow_jbrowse workflow parameters names matching constants_phaeo.py · cee41295
  Arthur Le Bars authored 3 years ago
  
  cee41295
- sync feature constants param name (jbrowse workflow) · 2a94665c
  Arthur Le Bars authored 3 years ago
  
  2a94665c
- fix jbrowse param and incorrect wf param name for 1 organism (blast interpro) (test) · eeb396a6
  Arthur Le Bars authored 3 years ago
  
  eeb396a6
- hda_id get error log · 3cd606a3
  Arthur Le Bars authored 3 years ago
  
  3cd606a3
Jul 26, 2021
- New blast+interproscan branch (merging issues with refactor_blast_interproscan_workflow) · ca829bee
  Troubardours authored 3 years ago
  
  ca829bee
May 31, 2021
- Update to wf_v7: sync in wf · b03e6a16
  Loraine Gueguen authored 3 years ago
  
  b03e6a16
- Update to wf_v7: sync in wf · d66753e7
  Loraine Gueguen authored 3 years ago
  
  d66753e7
- Update to wf_v7: sync in wf · d396190f
  Loraine Gueguen authored 3 years ago
  
  d396190f
- Rename files following conventions · 51e1c0e6
  Loraine Gueguen authored 3 years ago
  
  51e1c0e6
- Update to wf_v6 · 27cd39b8
  Loraine Gueguen authored 3 years ago
  
  27cd39b8
May 30, 2021
- Refactor run_wf (WIP) · 6b38826a
  Loraine Gueguen authored 3 years ago
  
  6b38826a
- Create utilities_bioblend.py. Refactor run_wf (WIP). · 7cdad582
  Loraine Gueguen authored 3 years ago
  
  7cdad582
- Refactor run_wf. Fix linting errors and warnings. · 5bbc05a7
  Loraine Gueguen authored 3 years ago
  
  5bbc05a7
- Refactor run_wf (WIP) · 0cffb203
  Loraine Gueguen authored 3 years ago
  
  0cffb203
May 28, 2021
- Refactor run_wf (WIP) · 49f5add2
  Loraine Gueguen authored 3 years ago
  
  49f5add2
- run_wf (WIP) · 4114dc00
  Loraine Guéguen authored 3 years ago
  
  4114dc00
- Set data file and dataset name as constants. Refactor run_wf (WIP) · 5f7757d4
  Loraine Gueguen authored 3 years ago
  
  5f7757d4
May 27, 2021

add phaeoexplorer_constants.py. Add constants. Add SpeciesData attributes.... · d44121bf

Loraine Gueguen authored 3 years ago

add phaeoexplorer_constants.py. Add constants. Add SpeciesData attributes. Update run_tool_and_download_single_output_dataset(). Move install_repository_revision() to utilities.py. Refactor run_wf (WIP)

d44121bf