Small fixes before release.

docker-compose.yml

@@ -6,7 +6,7 @@ services:
       context: .
     image: quay.io/mhoebeke/phytobsdash:${TAG:-latest}
     volumes:
-      - ./config/phytobsdash_config.toml:/app/config/phytobsdash_config.toml
+      - ./config/phytobsdash_config.toml:/config/phytobsdash_config.toml
     networks:
       - sno-net
     ports:

requirements.txt

-dash
-dash-ag-grid
-dash-leaflet
-dash-bootstrap-components
-flask
+dash~=2.10.1
+dash-ag-grid~=2.2.0
+dash-leaflet~=0.1.23
+dash-bootstrap-components~=1.4.1
+flask~=2.2.3
 gunicorn
-plotly
-pandas~=1.3.5
+plotly~=5.14.1
+pandas~=2.0.2
 toml~=0.10.2
-XlsxWriter
+XlsxWriter~=3.1.2
+

src/dash_app.py

@@ -12,6 +12,7 @@ logging.basicConfig()
 LOGGER = logging.getLogger(__name__)
 LOGGER.setLevel(logging.DEBUG)
 
+
 def build_app(config):
     """
     Build the PHYTOBS Dash application.
@@ -39,14 +40,14 @@ def build_app(config):
             className="bd-background"),
         html.Div(
             dbc.Nav(
-            [
-                dbc.NavItem(
-                    dbc.NavLink(
-                        f"{page['name']}", href=page["relative_path"],
+                [
+                    dbc.NavItem(
+                        dbc.NavLink(
+                            f"{page['name']}", href=page["relative_path"],
+                        )
                     )
-                )
-                for page in dash.page_registry.values()
-            ], pills=True, fill=True),
+                    for page in dash.page_registry.values()
+                ], pills=True, fill=True),
             className="bd-top-sections navbar navbar-dark bg-dark"
         ),
         html.A(
@@ -71,8 +72,8 @@ def build_app(config):
     LOGGER.debug("Done build_app")
     return app
 
-if __name__ == '__main__':
 
+if __name__ == '__main__':
     parser = argparse.ArgumentParser(
         prog='PHYTOBS Dashboard'
     )

src/dash_unicorn.py

@@ -3,7 +3,7 @@ import toml
 import phytobs_data_tools as pdt
 import dash_app
 
-config = toml.load('../config/phytobsdash_config.toml')
+config = toml.load('/config/phytobsdash_config.toml')
 (pdt.analyst_df, pdt.phytobs_df, pdt.hydro_df) = pdt.load_data(config)
 pdt.compute_most_abundant_taxa()
 pdt.compute_most_abundant_taxon_group()