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Commit 4c7524f3 authored by Loraine Gueguen's avatar Loraine Gueguen
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fix keys in create_org_param_dict_from_constants()

parent b6216293
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2 merge requests!12Release_2.0 next,!9Release 2.0 (merge dev to master)
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utilities.py
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......@@ -196,28 +196,28 @@ def create_org_param_dict_from_constants():
"""
org_param_dict={}
org_param_dict[constants.ORG_PARAM_NAME] = constants.ORG_PARAM_NAME
org_param_dict[constants.ORG_PARAM_DESC] = constants.ORG_PARAM_DESC
org_param_dict[constants.ORG_PARAM_DESC_GENUS] = constants.ORG_PARAM_DESC_GENUS
org_param_dict[constants.ORG_PARAM_DESC_SPECIES] = constants.ORG_PARAM_DESC_SPECIES
org_param_dict[constants.ORG_PARAM_DESC_SEX] = constants.ORG_PARAM_DESC_SEX
org_param_dict[constants.ORG_PARAM_DESC_STRAIN] = constants.ORG_PARAM_DESC_STRAIN
org_param_dict[constants.ORG_PARAM_DESC_COMMON_NAME] = constants.ORG_PARAM_DESC_COMMON_NAME
org_param_dict[constants.ORG_PARAM_DESC_ORIGIN] = constants.ORG_PARAM_DESC_ORIGIN
org_param_dict[constants.ORG_PARAM_DESC_MAIN_SPECIES] = constants.ORG_PARAM_DESC_MAIN_SPECIES
org_param_dict[constants.ORG_PARAM_DATA] = constants.ORG_PARAM_DATA
org_param_dict[constants.ORG_PARAM_DATA_GENOME_PATH] = constants.ORG_PARAM_DATA_GENOME_PATH
org_param_dict[constants.ORG_PARAM_DATA_TRANSCRIPTS_PATH] = constants.ORG_PARAM_DATA_TRANSCRIPTS_PATH
org_param_dict[constants.ORG_PARAM_DATA_PROTEINS_PATH] = constants.ORG_PARAM_DATA_PROTEINS_PATH
org_param_dict[constants.ORG_PARAM_DATA_GFF_PATH] = constants.ORG_PARAM_DATA_GFF_PATH
org_param_dict[constants.ORG_PARAM_DATA_INTERPRO_PATH] = constants.ORG_PARAM_DATA_INTERPRO_PATH
org_param_dict[constants.ORG_PARAM_DATA_ORTHOFINDER_PATH] = constants.ORG_PARAM_DATA_ORTHOFINDER_PATH
org_param_dict[constants.ORG_PARAM_DATA_BLASTP_PATH] = constants.ORG_PARAM_DATA_BLASTP_PATH
org_param_dict[constants.ORG_PARAM_DATA_BLASTX_PATH] = constants.ORG_PARAM_DATA_BLASTX_PATH
org_param_dict[constants.ORG_PARAM_DATA_GENOME_VERSION] = constants.ORG_PARAM_DATA_GENOME_VERSION
org_param_dict[constants.ORG_PARAM_DATA_OGS_VERSION] = constants.ORG_PARAM_DATA_GENOME_VERSION
org_param_dict[constants.ORG_PARAM_DATA_PERFORMED_BY] = constants.ORG_PARAM_DATA_PERFORMED_BY
org_param_dict[constants.ORG_PARAM_SERVICES] = constants.ORG_PARAM_SERVICES
org_param_dict[constants.ORG_PARAM_SERVICES_BLAST] = constants.ORG_PARAM_SERVICES_BLAST
org_param_dict["org_param_name"] = constants.ORG_PARAM_NAME
org_param_dict["org_param_desc"] = constants.ORG_PARAM_DESC
org_param_dict["org_param_desc_genus"] = constants.ORG_PARAM_DESC_GENUS
org_param_dict["org_param_desc_species"] = constants.ORG_PARAM_DESC_SPECIES
org_param_dict["org_param_desc_sex"] = constants.ORG_PARAM_DESC_SEX
org_param_dict["org_param_desc_strain"] = constants.ORG_PARAM_DESC_STRAIN
org_param_dict["org_param_desc_common_name"] = constants.ORG_PARAM_DESC_COMMON_NAME
org_param_dict["org_param_desc_origin"] = constants.ORG_PARAM_DESC_ORIGIN
org_param_dict["org_param_desc_main_species"] = constants.ORG_PARAM_DESC_MAIN_SPECIES
org_param_dict["org_param_data"] = constants.ORG_PARAM_DATA
org_param_dict["org_param_data_genome_path"] = constants.ORG_PARAM_DATA_GENOME_PATH
org_param_dict["org_param_data_transcripts_path"] = constants.ORG_PARAM_DATA_TRANSCRIPTS_PATH
org_param_dict["org_param_data_proteins_path"] = constants.ORG_PARAM_DATA_PROTEINS_PATH
org_param_dict["org_param_data_gff_path"] = constants.ORG_PARAM_DATA_GFF_PATH
org_param_dict["org_param_data_interpro_path"] = constants.ORG_PARAM_DATA_INTERPRO_PATH
org_param_dict["org_param_data_orthofinder_path"] = constants.ORG_PARAM_DATA_ORTHOFINDER_PATH
org_param_dict["org_param_data_blastp_path"] = constants.ORG_PARAM_DATA_BLASTP_PATH
org_param_dict["org_param_data_blastx_path"] = constants.ORG_PARAM_DATA_BLASTX_PATH
org_param_dict["org_param_data_genome_version"] = constants.ORG_PARAM_DATA_GENOME_VERSION
org_param_dict["org_param_data_ogs_version"] = constants.ORG_PARAM_DATA_GENOME_VERSION
org_param_dict["org_param_data_performed_by"] = constants.ORG_PARAM_DATA_PERFORMED_BY
org_param_dict["org_param_services"] = constants.ORG_PARAM_SERVICES
org_param_dict["org_param_services_blast"] = constants.ORG_PARAM_SERVICES_BLAST
return org_param_dict
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