Skip to content
Snippets Groups Projects
Commit 7ca737a5 authored by Loraine Gueguen's avatar Loraine Gueguen
Browse files

fix filepath for upload_from_galaxy_fs()

parent 7208a7a9
No related branches found
No related tags found
2 merge requests!10Release 2.0,!9Release 2.0 (merge dev to master)
This commit is part of merge request !10. Comments created here will be created in the context of that merge request.
Hide whitespace changes
Inline Side-by-side
Showing
with 3 additions and 1 deletion
gga_load_data.py
+ 3
− 1
View file @ 7ca737a5
...@@ -183,9 +183,11 @@ class LoadData(speciesData.SpeciesData): ...@@ -183,9 +183,11 @@ class LoadData(speciesData.SpeciesData):
logging.info("Skipping useless file '%s'" % single_file) logging.info("Skipping useless file '%s'" % single_file)
continue continue
single_file_path=os.path.join(CONTAINER_DATA_DIR_ROOT,single_file)
logging.info("Adding file '%s' with type '%s' and name '%s'" % (single_file, ftype, clean_name)) logging.info("Adding file '%s' with type '%s' and name '%s'" % (single_file, ftype, clean_name))
datasets = prj_lib.upload_from_galaxy_fs( datasets = prj_lib.upload_from_galaxy_fs(
single_file, single_file_path,
folder=folder, folder=folder,
link_data_only='link_to_files', link_data_only='link_to_files',
file_type=ftype, file_type=ftype,
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment