Commits · dce8482bf3a773880e5a9870ff2dbd6deb0128be · abims / e-infra / gga_load_data

Jul 25, 2022
- typo fix: debug logging to display analysis IDs used by galaxy tools (blast interpro workflow) · dce8482b
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  dce8482b
- debug logging to display analysis IDs used by galaxy tools (blast interpro workflow) · b4965f39
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  b4965f39
- gga_run_workflow_jbrowse workflow parameters names matching constants_phaeo.py · 2a954ac2
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  2a954ac2
- sync feature constants param name (jbrowse workflow) · fce90312
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  fce90312
- fix jbrowse param and incorrect wf param name for 1 organism (blast interpro) (test) · 84fdb5df
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  84fdb5df
- skip missing features for blast and interpro (test) · ee243ad6
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  ee243ad6
- added workflow path from constants_phaeo.py for single organism instances · b0b9f749
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  b0b9f749
- Changed versions of load blast and interpro in Chado galaxy tools from... · 973c1daa
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
```
Changed versions of load blast and interpro in Chado galaxy tools from 2.3.4+galaxy0 to 2.3.7+galaxy0 (sqlachemy tool error fix)
```
  973c1daa
- hda_id get error log · 4edf13c7
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  4edf13c7
- hda_id get error log · 55f2497c
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  55f2497c
- hda_id get error log · 21d9a1c1
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  21d9a1c1
- hda_id get error log · 4b96b2e5
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  4b96b2e5
- Fix for bioblend get_datasets method throwing ConnectionError · bd4b7440
  Arthur Le Bars authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  bd4b7440
- New blast+interproscan branch (merging issues with refactor_blast_interproscan_workflow) · 81e0aa54
  Troubardours authored 3 years ago and Loraine Gueguen committed 2 years ago
  
  81e0aa54
Nov 30, 2021
- Merge branch 'add_citrus_protein' into 'dev' · a08c7bc6
  Loraine Gueguen authored 3 years ago
```
Add example citrus sinensis peptide fasta file

See merge request !41
```
  a08c7bc6
- Add citrus sinensis peptide fasta file · 65f44857
  Loraine Gueguen authored 3 years ago
  
  65f44857
- Add citrus sinensis peptide fasta file · a9d4bd6f
  Loraine Gueguen authored 3 years ago
  
  a9d4bd6f
Nov 25, 2021
- Update docs filename · 06632f3f
  Loraine Guéguen authored 3 years ago
  
  v2.3.0
  
  06632f3f
- Merge branch 'dev' into 'master' · 6af8416f
  Loraine Gueguen authored 3 years ago
```
v2.3.0

See merge request !37
```
  6af8416f
- Merge branch 'developper_documentation' into 'dev' · b096600b
  Loraine Gueguen authored 3 years ago
```
Developper documentation

See merge request !32
```
  b096600b
- Update README and docs · 9fd64a29
  Loraine Guéguen authored 3 years ago
  
  9fd64a29
Nov 04, 2021
- Merge branch 'https_without_authelia' into 'master' · d0b1cc86
  Loraine Gueguen authored 3 years ago
```
Release v2.2.0

See merge request !36
```
  v2.2.0
  
  d0b1cc86
- Update contributors · 51a0344e
  Loraine Gueguen authored 3 years ago
  
  51a0344e
- Fix utilities jbrowse_links_dict · e27091b3
  Romain Dallet authored 3 years ago
  
  e27091b3
- Fix utilities jbrowse_links_dict · 81812824
  Romain Dallet authored 3 years ago
  
  81812824
- Add logging info for https without authelia · 82539d23
  Romain Dallet authored 3 years ago
  
  82539d23
Nov 03, 2021
- Fix templates https and authelia conditions · 365e2404
  Romain Dallet authored 3 years ago
  
  365e2404
Oct 18, 2021
- Fix utilities.py · 4b7bede6
  Romain Dallet authored 3 years ago
  
  4b7bede6
- Fix utilities.py · 28551f38
  Romain Dallet authored 3 years ago
  
  28551f38
Oct 14, 2021
- Fix genus species docker-compose template for jbrowse · 4cb9ae6c
  Romain Dallet authored 3 years ago
  
  4cb9ae6c
Sep 09, 2021
- BASE_URL_PROTO as condition · 9f6e4fc6
  Romain Dallet authored 3 years ago
  
  9f6e4fc6
- Fix nginx conf for galaxy without authelia · 599aef82
  Romain Dallet authored 3 years ago
  
  599aef82
Sep 07, 2021
- Fix some middlewares and add env var BASE_URL_PROTO · caebe444
  Romain Dallet authored 3 years ago
  
  caebe444
Aug 26, 2021
- fix galaxy conf · aefc4efe
  Romain Dallet authored 3 years ago
  
  aefc4efe
- fix galaxy conf · 66f8f07d
  Romain Dallet authored 3 years ago
  
  66f8f07d
- fix galaxy conf · bffc9ea5
  Romain Dallet authored 3 years ago
  
  bffc9ea5
- fix galaxy conf · 962e34ce
  Romain Dallet authored 3 years ago
  
  962e34ce
Aug 25, 2021
- add tripal_prefix in genus_species routers · 63283d3a
  Romain Dallet authored 3 years ago
  
  63283d3a
Aug 24, 2021
- Add auth_config_path conditions · 3cc66758
  Romain Dallet authored 3 years ago
  
  3cc66758
- fix make_dirs · 2e151439
  Romain Dallet authored 3 years ago
  
  2e151439