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abims
e-infra
gga_load_data
Commits
e9a0a824
Commit
e9a0a824
authored
3 years ago
by
Loraine Guéguen
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Update README
parent
3a63edf0
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!18
Release v2.1.0
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e9a0a824
...
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@@ -66,7 +66,7 @@ in the `examples` folder.
**The input file and config file have to be the same for all scripts!**
-
Deploy stacks
part
:
-
Deploy
Docker
stacks:
```
bash
$
python3 /path/to/repo/gga_init.py input_file.yml
\
...
...
@@ -76,7 +76,7 @@ $ python3 /path/to/repo/gga_init.py input_file.yml \
[
-v
/--verbose]
```
-
Copy source data file:
-
Copy source data file
s
:
```
bash
$
python3 /path/to/repo/gga_get_data.py input_file.yml
\
...
...
@@ -93,7 +93,7 @@ $ python3 /path/to/repo/gga_load_data.py input_file.yml \
[
-v
/--verbose]
```
-
Run a workflow in
g
alaxy (example):
-
Run a workflow in
G
alaxy (example
script, specific to Phaeoexplorer data
):
```
bash
$
python3 /path/to/repo/gga_run_workflow_phaeo_jbrowse.py input_file.yml
\
...
...
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